5GNI
The crystal structure of PECAM-1 IgL1-2 trans-homophilic dimer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-25 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0719 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 60.522, 141.496, 169.918 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.447 - 3.008 |
R-factor | 0.2234 |
Rwork | 0.221 |
R-free | 0.28060 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.343 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 50.000 |
High resolution limit [Å] | 3.000 |
Number of reflections | 14823 |
<I/σ(I)> | 25.12 |
Completeness [%] | 99.7 |
Redundancy | 7.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | 0.1M MES pH6.5, 1.8M (NH4)2SO4, 0.01M CoCl2 |