5GLQ
Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose and xylotriose, calcium-free form
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE BL-5A |
| Synchrotron site | Photon Factory |
| Beamline | BL-5A |
| Temperature [K] | 293 |
| Detector technology | CCD |
| Collection date | 2015-06-03 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 1.000 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 74.801, 61.489, 79.047 |
| Unit cell angles | 90.00, 95.72, 90.00 |
Refinement procedure
| Resolution | 78.650 - 1.700 |
| R-factor | 0.15009 |
| Rwork | 0.149 |
| R-free | 0.17527 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5glk |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.394 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0124) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 100.000 | 1.760 |
| High resolution limit [Å] | 1.700 | 1.700 |
| Rmerge | 0.074 | 0.519 |
| Number of reflections | 77216 | |
| <I/σ(I)> | 24.05 | 3.03 |
| Completeness [%] | 98.1 | 84.1 |
| Redundancy | 7.2 | 5.5 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 25% PEG3350, 8% Tacsimate |
