5GLP
Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose, calcium-bound form
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
| Synchrotron site | Photon Factory |
| Beamline | AR-NW12A |
| Temperature [K] | 95 |
| Detector technology | CCD |
| Collection date | 2015-05-25 |
| Detector | ADSC QUANTUM 210 |
| Wavelength(s) | 1.0000 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 74.801, 61.329, 79.070 |
| Unit cell angles | 90.00, 95.51, 90.00 |
Refinement procedure
| Resolution | 78.710 - 1.800 |
| R-factor | 0.15237 |
| Rwork | 0.151 |
| R-free | 0.17442 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5gll |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.249 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | REFMAC (5.8.0124) |
| Refinement software | REFMAC (5.8.0124) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 100.000 | 1.860 |
| High resolution limit [Å] | 1.800 | 1.800 |
| Rmerge | 0.080 | 0.354 |
| Number of reflections | 66300 | |
| <I/σ(I)> | 25.8 | 6.4 |
| Completeness [%] | 99.6 | 96.2 |
| Redundancy | 7.5 | 7.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 25% PEG 3350, 8% Tacsimate |
