Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5GIU

Crystal structure of Xaa-Pro peptidase from Deinococcus radiodurans, metal-free active site

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsRRCAT INDUS-2 BEAMLINE PX-BL21
Synchrotron siteRRCAT INDUS-2
BeamlinePX-BL21
Temperature [K]100
Detector technologyCCD
Collection date2013-09-06
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.979470
Spacegroup nameP 43 21 2
Unit cell lengths60.327, 60.327, 203.515
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.890 - 1.610
R-factor0.1836
Rwork0.183
R-free0.20020
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5cdv
RMSD bond length0.016
RMSD bond angle1.470
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10_2152: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.8901.640
High resolution limit [Å]1.6101.610
Rmerge0.0550.295
Number of reflections49035
<I/σ(I)>20.52.9
Completeness [%]98.079.4
Redundancy62.2
CC(1/2)0.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH2940.1M phospho-citrate pH 4.54, 0.2M NaCl, 14% PEG 8000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon