5F4O
Protruding domain of GII.17 norovirus Kawasaki308
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-13 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.87260 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 75.720, 86.970, 97.350 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.485 - 1.590 |
R-factor | 0.1526 |
Rwork | 0.151 |
R-free | 0.17400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5f4m |
RMSD bond length | 0.008 |
RMSD bond angle | 1.189 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.485 | 1.620 | |
High resolution limit [Å] | 1.580 | 7.060 | 1.580 |
Rmerge | 0.066 | 0.026 | 0.712 |
Rmeas | 0.076 | 0.030 | 0.826 |
Total number of observations | 333283 | ||
Number of reflections | 85727 | 1042 | 6176 |
<I/σ(I)> | 11.75 | 36.67 | 1.68 |
Completeness [%] | 96.5 | 91.2 | 95.4 |
Redundancy | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | Magnesium Chloride, PEG8000, Tris-HCl |