5F3A
Crystal structure of the bromodomain of human ATAD2 in complex with Compound A14
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-27 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.00003 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 79.938, 79.938, 137.533 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.788 - 1.599 |
R-factor | 0.1807 |
Rwork | 0.179 |
R-free | 0.21000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3dai |
RMSD bond length | 0.008 |
RMSD bond angle | 0.777 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.5.7) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 69.228 | 48.788 | 1.690 |
High resolution limit [Å] | 1.599 | 5.060 | 1.600 |
Rmerge | 0.032 | 0.663 | |
Rmeas | 0.048 | ||
Rpim | 0.011 | 0.008 | 0.155 |
Total number of observations | 667289 | 20995 | 91690 |
Number of reflections | 34993 | ||
<I/σ(I)> | 35.8 | 81.4 | 5.1 |
Completeness [%] | 99.6 | 99.9 | 97.5 |
Redundancy | 19.1 | 16.2 | 18.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 277 | 2M (NH4)2SO4, 0.1M Bis-Tris pH 5.5 |