5F24
Crystal structure of dual specific IMPase/NADP phosphatase bound with D-inositol-1-phosphate
Replaces: 4G60Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2012-03-30 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 60.567, 67.835, 137.297 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 68.400 - 2.500 |
R-factor | 0.1753 |
Rwork | 0.172 |
R-free | 0.23290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3qmf |
RMSD bond length | 0.016 |
RMSD bond angle | 1.832 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | MOLREP (10.2.35) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 68.648 | 19.614 | 2.630 |
High resolution limit [Å] | 2.498 | 7.900 | 2.500 |
Rmerge | 0.023 | 0.497 | |
Rmeas | 0.114 | ||
Rpim | 0.042 | 0.010 | 0.199 |
Total number of observations | 145535 | 4386 | 20984 |
Number of reflections | 20273 | ||
<I/σ(I)> | 18.9 | 61.3 | 4.3 |
Completeness [%] | 99.8 | 93.6 | 99.9 |
Redundancy | 7.2 | 6.4 | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 0.2M CACL2 2H20, 0.1M HEPES PH 7.0, 15% (W/V) PEG 3350 |