Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5F1O

human CD38 in complex with nanobody MU551

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2012-11-07
DetectorADSC QUANTUM 315r
Wavelength(s)0.97852
Spacegroup nameP 21 21 21
Unit cell lengths33.141, 96.190, 143.254
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.200
R-factor0.1713
Rwork0.168
R-free0.23660
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1yh3
RMSD bond length0.009
RMSD bond angle1.305
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.280
High resolution limit [Å]2.2004.7402.200
Rmerge0.0740.0450.461
Total number of observations182459
Number of reflections24162
<I/σ(I)>13.4
Completeness [%]99.296.6100
Redundancy7.67.27.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52980.2M sodium acetate, 0.1M Tris-HCl, 25% PEG4000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon