5EZR
Crystal Structure of PVX_084705 bound to compound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-19 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97929 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 191.103, 117.967, 68.162 |
Unit cell angles | 90.00, 95.17, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.500 |
R-factor | 0.2271 |
Rwork | 0.225 |
R-free | 0.26570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5dyl |
RMSD bond length | 0.008 |
RMSD bond angle | 1.196 |
Data scaling software | SCALEPACK |
Phasing software | REFMAC |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.075 | 0.032 | 0.678 |
Rmeas | 0.086 | 0.037 | 0.780 |
Rpim | 0.042 | 0.019 | 0.380 |
Total number of observations | 208061 | ||
Number of reflections | 50530 | ||
<I/σ(I)> | 7.6 | ||
Completeness [%] | 97.7 | 99.5 | 81.9 |
Redundancy | 4.1 | 4.1 | 3.9 |
CC(1/2) | 0.994 | 0.821 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7 | 293 | 15.5% Peg3350, 0.1M Hepes pH 7, 0.1M Succinate pH 7 |