5EXO
Crystal structure of Human galectin-3 CRD in complex with methyl 2-O-acetyl-3-O-(2H-chromene-3-yl-methyl)-a-D-galactopyranoside inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | MACSCIENCE |
Temperature [K] | 293 |
Detector technology | CCD |
Collection date | 2010-01-31 |
Detector | BRUKER SMART 6000 |
Wavelength(s) | 1.54184 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.796, 58.411, 63.928 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.120 - 1.502 |
R-factor | 0.1586 |
Rwork | 0.157 |
R-free | 0.19280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2nn8 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.420 |
Data reduction software | SAINT |
Data scaling software | SCALA (3.3.16) |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.122 | 63.928 | 1.580 |
High resolution limit [Å] | 1.502 | 4.750 | 1.500 |
Rmerge | 0.047 | 0.257 | |
Rmeas | 0.057 | ||
Rpim | 0.019 | 0.014 | 0.226 |
Total number of observations | 113115 | 10164 | 3405 |
Number of reflections | 21563 | ||
<I/σ(I)> | 16.3 | 44.1 | 2.4 |
Completeness [%] | 95.0 | 99.9 | 65.7 |
Redundancy | 5.2 | 12.3 | 1.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 31% PEG 6000, 100MM MGCL2, 8MM BETA MERCEPTOETHANOL, 100MM TRIS HCL |