5EUV
Crystal structure of a cold-adapted dimeric beta-D-galactosidase from Paracoccus sp. 32d strain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-07-29 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.967 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 78.490, 106.240, 199.390 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.770 - 2.400 |
R-factor | 0.16856 |
Rwork | 0.165 |
R-free | 0.23088 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3gm8 |
RMSD bond length | 0.017 |
RMSD bond angle | 1.874 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | BALBES |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.500 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.120 | 0.710 |
Number of reflections | 65576 | |
<I/σ(I)> | 11.67 | 2.07 |
Completeness [%] | 99.4 | 97.9 |
Redundancy | 4.39 | 3.94 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291 | 24% PEG MME 2000, 0.1M ammonium acetate, Bis-Tris pH 6.0 |