Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5ETK

E. coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase complexed with AMPCPP and inhibitor at 1.09 angstrom resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyCCD
Collection date2015-02-07
DetectorADSC QUANTUM 315r
Wavelength(s)0.9707
Spacegroup nameP 1 21 1
Unit cell lengths35.790, 57.690, 38.450
Unit cell angles90.00, 115.57, 90.00
Refinement procedure
Resolution34.680 - 1.090
R-factor0.11672
Rwork0.116
R-free0.13640
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1q0n
RMSD bond length0.028
RMSD bond angle1.983
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.6801.110
High resolution limit [Å]1.0901.090
Rmerge0.0730.563
Number of reflections57389
<I/σ(I)>143.1
Completeness [%]97.795
Redundancy7.26.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.55293Protein 6.6 mg/mL, 1 mM AMPCPP, 1 mM inhibitor, 2 mM magnesium chloride, 22 %w/v PEG4000, 0.1 M sodium HEPES, 0.16 M CaCl2

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon