5ERW
Structure of HCV E2 glycoprotein antigenic Epitope II bound to the broadly neutralizing antibody HC84-26
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | Cu FINE FOCUS |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-12-05 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 37.700, 101.240, 180.320 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.080 - 2.900 |
R-factor | 0.2195 |
Rwork | 0.215 |
R-free | 0.25800 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.016 |
RMSD bond angle | 1.487 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.080 | 51.684 | 3.060 |
High resolution limit [Å] | 2.900 | 9.170 | 2.900 |
Rmerge | 0.041 | 0.454 | |
Rmeas | 0.097 | ||
Rpim | 0.048 | 0.028 | 0.277 |
Total number of observations | 58541 | 2165 | 7157 |
Number of reflections | 15740 | ||
<I/σ(I)> | 11.3 | 21.8 | 2.8 |
Completeness [%] | 98.2 | 99.3 | 95.4 |
Redundancy | 3.7 | 3.6 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 5.5 | 293 | 15% (w/v) PEG 10,000, 0.1 M Sodium citrate/ Citric acid pH 5.5, 2% (v/v) Dioxane |