Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5EO6

Coproporphyrinogen III oxidase (HemF) from Acinetobacter baumannii

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2015-06-17
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.978560
Spacegroup nameP 1 21 1
Unit cell lengths71.140, 97.160, 71.260
Unit cell angles90.00, 115.79, 90.00
Refinement procedure
Resolution50.000 - 1.450
R-factor0.1358
Rwork0.135
R-free0.16790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1VJU chain A
RMSD bond length0.013
RMSD bond angle1.170
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0001.490
High resolution limit [Å]1.4506.4801.450
Rmerge0.0500.0260.486
Rmeas0.0590.0310.569
Total number of observations575739
Number of reflections153349170411333
<I/σ(I)>15.3136.352.73
Completeness [%]99.49599.7
Redundancy3.753.67
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.629025.75 mg/mL AcbaC.17085.a.B1.PS02404 with Rigaku Reagents JCSG+ a4: 30% MPD, 20 mM calcium chloride, 100 mM sodium acetate / acetic acid, pH 4.6, cryoprotection: direct, tray 263906a4, puck fyy9-6

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon