5EMM
Crystal structure of PRMT5:MEP50 with Compound 15 and sinefungin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-07 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 103.530, 138.180, 179.210 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 89.610 - 2.370 |
R-factor | 0.2372 |
Rwork | 0.234 |
R-free | 0.29330 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.412 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (3.3.20) |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 89.646 | 89.646 | 2.430 |
High resolution limit [Å] | 2.370 | 10.600 | 2.370 |
Rmerge | 0.015 | 0.814 | |
Rmeas | 0.064 | ||
Rpim | 0.028 | 0.008 | 0.407 |
Total number of observations | 260251 | 2660 | 19315 |
Number of reflections | 52316 | ||
<I/σ(I)> | 19.4 | 66.2 | 2 |
Completeness [%] | 99.8 | 96.6 | 99.4 |
Redundancy | 5 | 4.2 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M Sodium acetate, 0.1 M Sodium citrate pH 6.1, 10% w/v PEG 4000 |