5EMA
Crystal structure of the SNX27 PDZ domain bound to the phosphorylated C-terminal LRRC3B PDZ binding motif
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-10-01 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.95370 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.171, 48.490, 56.229 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.721 - 1.320 |
R-factor | 0.1632 |
Rwork | 0.162 |
R-free | 0.17880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4z8j |
RMSD bond length | 0.010 |
RMSD bond angle | 1.431 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.500 | 1.340 |
High resolution limit [Å] | 1.320 | 1.320 |
Rmerge | 0.054 | 0.614 |
Number of reflections | 23850 | |
<I/σ(I)> | 14.9 | 2.5 |
Completeness [%] | 96.7 | 86.4 |
Redundancy | 7.1 | 6.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 4.6 | 293 | 2 M ammonium sulphate and 0.1 M sodium acetate (pH 4.6) |