5EGA
2009 H1N1 PA endonuclease domain in complex with an N-acylhydrazone inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-14 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 0.97121 |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 73.989, 73.989, 128.546 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 2.150 |
R-factor | 0.2071 |
Rwork | 0.205 |
R-free | 0.23420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5des |
RMSD bond length | 0.012 |
RMSD bond angle | 1.415 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0124) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.230 |
High resolution limit [Å] | 2.150 | 4.630 | 2.150 |
Rmerge | 0.070 | 0.040 | 0.930 |
Rmeas | 0.073 | 0.041 | 0.962 |
Rpim | 0.018 | 0.010 | 0.241 |
Total number of observations | 198693 | ||
Number of reflections | 11896 | ||
<I/σ(I)> | 11.8 | ||
Completeness [%] | 99.4 | 95.7 | 99.7 |
Redundancy | 16.7 | 14.9 | 15 |
CC(1/2) | 0.999 | 0.863 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | 0.2 M magnesium chloride, 2 mM manganese chloride, 0.1 M Tris, pH 8.5, 30% w/v PEG4000 |