5EAW
Crystal structure of Dna2 nuclease-helicase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-02-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.987 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 120.900, 148.600, 170.500 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 3.000 |
R-factor | 0.2102 |
Rwork | 0.209 |
R-free | 0.24680 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.700 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.110 |
High resolution limit [Å] | 3.000 | 6.460 | 3.000 |
Rmerge | 0.131 | 0.038 | 0.787 |
Rmeas | 0.149 | 0.043 | 0.897 |
Rpim | 0.068 | 0.020 | 0.419 |
Total number of observations | 274504 | ||
Number of reflections | 61754 | ||
<I/σ(I)> | 4.1 | ||
Completeness [%] | 98.3 | 96.7 | 98.9 |
Redundancy | 4.4 | 4.3 | 4.5 |
CC(1/2) | 0.999 | 0.708 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 80 mm MES pH 6.5, 250 mM Li2SO4, 8-12% PEG MME 5000, 2 mM MgCl2 |