5E9Y
Crystal Structure of BAZ2B bromodomain in complex with MPD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 81.317, 96.190, 57.749 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.289 - 1.650 |
R-factor | 0.1794 |
Rwork | 0.178 |
R-free | 0.20420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ir5 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.016 |
Data reduction software | XDS |
Data scaling software | Aimless (0.3.11) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.100 | 48.100 | 1.680 |
High resolution limit [Å] | 1.650 | 9.040 | 1.650 |
Rmerge | 0.043 | 0.040 | 0.633 |
Rpim | 0.018 | 0.018 | 0.263 |
Total number of observations | 181473 | 1155 | 8915 |
Number of reflections | 27621 | ||
<I/σ(I)> | 20.2 | 47.9 | 2.9 |
Completeness [%] | 99.9 | 98.7 | 99.9 |
Redundancy | 6.6 | 5.8 | 6.7 |
CC(1/2) | 0.999 | 0.997 | 0.938 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | PEG500MME (20%), PEG1000 (2%), PEG3350 (2%), PEG20000 (10%), MPD (2%) |