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5E7W

X-ray Structure of Human Recombinant 2Zn insulin at 0.92 Angstrom

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2012-09-27
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.77
Spacegroup nameH 3
Unit cell lengths81.820, 81.820, 33.850
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution10.000 - 0.952
Rwork0.111
R-free0.14440
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3w7y
Data reduction softwareXDS (Fast dp Xia 2)
Data scaling softwareAimless (Fast dp Xia 2)
Phasing softwarePHASER
Refinement softwareSHELXL (2014/7)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.9100.940
High resolution limit [Å]0.9200.920
Rmerge0.0340.967
Number of reflections58647
<I/σ(I)>20.21.6
Completeness [%]100.0100
Redundancy54.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE6.3293The crystals were prepared by a batch method similar to that of Baker et al, 1988 [1], modified as follows: 0.01g of insulin as a fine powder was placed in a clean test tube; 0.02M HCl was added to dissolve the protein; on addition of 0.15 mL of 0.15 M zinc acetate the solution became cloudy due to precipitation of the protein; 0.3 mL of acetone and then 0.5 mL of trisodium citrate together with 0.8 mL of water were added and the solution went clear; the pH was checked and increased with NaOH to a pH between 8 and 9 for different batches, thus ensuring complete dissolution. It was then adjusted to the required value of pH 6.3. If any slight turbidity occurred, it was removed by warming the solution. The solution was then filtered using a Millipore membrane/acetate cellulose acetate filter. This removes any nuclei which will encourage precipitation or formation of masses of small crystals. The solution was then warmed to 50 deg C by surrounding the test tube with preheated water in a Dewar. This allowed the solution to cool slowly to room temperature. The test tube was lightly sealed with cling film; crystals formed within a few days and were of suitable size for X-ray diffraction within two weeks; the test tube containing crystals was kept at 4 degC prior to data collection. The crystal used for data collection was about 0.2 mm3.

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