5E7K
Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-12-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 209.500, 450.100, 621.600 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 173.719 - 3.200 |
R-factor | 0.1916 |
Rwork | 0.191 |
R-free | 0.25790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4wq1 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.670 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 200.000 | 173.719 | 3.300 |
High resolution limit [Å] | 3.200 | 50.000 | 3.200 |
Rmerge | 0.375 | 0.053 | 4.297 |
Rmeas | 0.053 | 4.352 | |
Total number of observations | 103886962 | ||
Number of reflections | 955810 | 287 | 83729 |
<I/σ(I)> | 37.7 | 92.31 | 1.1 |
Completeness [%] | 100.0 | 90.8 | 100 |
Redundancy | 108.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | PEG 20000, PEG 550mme, KSCN, Tris-OAc |