5E5B
Crystal structure of Human Spt16 N-terminal domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-09-19 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.979493 |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 246.570, 246.570, 246.570 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.642 - 1.840 |
R-factor | 0.1574 |
Rwork | 0.156 |
R-free | 0.17560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3biq |
RMSD bond length | 0.008 |
RMSD bond angle | 1.216 |
Data reduction software | xia2 |
Data scaling software | Aimless (3.3.16) |
Phasing software | PHASER (2.3.0) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 87.180 | 87.180 | 1.880 |
High resolution limit [Å] | 1.840 | 8.210 | 1.840 |
Rmerge | 0.082 | 0.029 | 0.779 |
Rpim | 0.019 | 0.007 | 0.193 |
Total number of observations | 1124024 | 13455 | 72859 |
Number of reflections | 56315 | ||
<I/σ(I)> | 28.1 | 77.1 | 4.2 |
Completeness [%] | 100.0 | 99.1 | 100 |
Redundancy | 20 | 17.6 | 17.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292 | 17% (w/v) PEG 3350, 0.1 M ammonium iodide and 0.1 M sodium acetate pH 5 |