5E2C
Crystal structure of N-terminal domain of cytoplasmic peptidase PepQ from Mycobacterium tuberculosis H37Rv
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-15 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97924 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.684, 60.202, 96.268 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.120 - 1.700 |
R-factor | 0.1404 |
Rwork | 0.138 |
R-free | 0.18630 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.236 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | HKL-3000 |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.730 |
High resolution limit [Å] | 1.700 | 4.610 | 1.700 |
Rmerge | 0.060 | 0.045 | 0.389 |
Rmeas | 0.066 | 0.049 | 0.456 |
Rpim | 0.025 | 0.019 | 0.233 |
Total number of observations | 212022 | ||
Number of reflections | 33012 | ||
<I/σ(I)> | 11.8 | ||
Completeness [%] | 98.5 | 98.4 | 86.7 |
Redundancy | 6.4 | 6.4 | 3.4 |
CC(1/2) | 0.992 | 0.870 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | 0.1 MBis-Tris, 20% PEG MME 5000 |