5DY2
Crystal structure of Dbr2 with mutation M27L
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-12-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.620, 81.020, 86.530 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.310 - 1.570 |
R-factor | 0.1618 |
Rwork | 0.161 |
R-free | 0.19000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5dxx |
RMSD bond length | 0.006 |
RMSD bond angle | 0.992 |
Data reduction software | XSCALE |
Data scaling software | XSCALE |
Phasing software | PHASER (2.5.5) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.310 | 1.610 | |
High resolution limit [Å] | 1.570 | 7.020 | 1.570 |
Rmerge | 0.078 | 0.028 | 0.486 |
Rmeas | 0.084 | 0.030 | 0.523 |
Total number of observations | 379523 | ||
Number of reflections | 52385 | 664 | 3823 |
<I/σ(I)> | 23.75 | 54.81 | 5.81 |
Completeness [%] | 100.0 | 97.8 | 100 |
Redundancy | 7.24 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 278 | 0.1M Bis-Tris, 25% PEG3350 |