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5DVA

Fragments bound to the OXA-48 beta-lactamase: Compound 1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.2
Synchrotron siteBESSY
Beamline14.2
Temperature [K]100
Detector technologyCCD
Collection date2015-01-25
DetectorRAYONIX MX-225
Wavelength(s)0.91841
Spacegroup nameP 21 21 21
Unit cell lengths91.037, 109.660, 124.241
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.946 - 2.500
R-factor0.234174451067
Rwork0.232
R-free0.28663
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3hbr
RMSD bond length0.002
RMSD bond angle0.453
Data reduction softwareXDS (20141118)
Data scaling softwareAimless (0.5.23)
Phasing softwarePHASER (2.5.6)
Refinement softwarePHENIX (dev_2328)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.5002.589
High resolution limit [Å]2.5002.500
Rmerge0.299
Number of reflections43599
<I/σ(I)>41.8
Completeness [%]99.0100
Redundancy22
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52950.1M HEPES pH 7.5 8-12% PEG8000 4% 1-butanol

219869

PDB entries from 2024-05-15

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