5DSF
Crystal structure of the mercury-bound form of MerB mutant D99S
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-19 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.075 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 37.680, 88.349, 52.671 |
Unit cell angles | 90.00, 100.93, 90.00 |
Refinement procedure
Resolution | 36.996 - 1.954 |
R-factor | 0.1687 |
Rwork | 0.165 |
R-free | 0.20840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3f0o |
RMSD bond length | 0.013 |
RMSD bond angle | 1.374 |
Data reduction software | XDS |
Data scaling software | XDS |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.024 |
High resolution limit [Å] | 1.954 | 1.954 |
Rmerge | 0.077 | 0.584 |
Number of reflections | 24336 | |
<I/σ(I)> | 12.14 | |
Completeness [%] | 99.1 | 96.81 |
Redundancy | 3.7 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 296 | 23 % polyethylene glycol 2000 MME, 0.2 M sodium acetate pH 5.5, 0.2 M potassium bromide. Before flash freezing, the same precipitant was used except 25 % polyethylene glycol 2000 MME was used as a cryo-protectant |