5DMH
Crystal structure of a domain of unknown function (DUF1537) from Ralstonia eutropha H16 (H16_A1561), Target EFI-511666, complex with ADP.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-12 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.130, 87.666, 178.988 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.365 - 1.800 |
R-factor | 0.1546 |
Rwork | 0.153 |
R-free | 0.18530 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.282 |
Data scaling software | Aimless (0.1.27) |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.365 | 178.990 | 1.840 |
High resolution limit [Å] | 1.800 | 9.180 | 1.800 |
Rmerge | 0.103 | 0.056 | 0.857 |
Rpim | 0.029 | 0.018 | 0.271 |
Total number of observations | 996969 | 7543 | 48046 |
Number of reflections | 78487 | ||
<I/σ(I)> | 17.3 | 39 | 2.7 |
Completeness [%] | 100.0 | 97.5 | 100 |
Redundancy | 12.7 | 10.9 | 10.8 |
CC(1/2) | 0.999 | 0.997 | 0.852 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | Protein (30 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 10 mM ATP, 5 mM MgCl2); Reservoir (MCSG1 (H1) - 0.2 M Ammonium Fluoride, 20%(w/v) PEG 3350); Cryoprotection (80% Reservoir, 20% glycerol) |