5DKR
Crystal Structure of Calcium-loaded S100B bound to SBi29
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-12-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.127092 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.745, 47.443, 90.343 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.298 - 1.742 |
R-factor | 0.2094 |
Rwork | 0.205 |
R-free | 0.24690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1mho |
RMSD bond length | 0.013 |
RMSD bond angle | 1.217 |
Data scaling software | Aimless (0.1.26) |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.300 | 33.300 | 1.770 |
High resolution limit [Å] | 1.740 | 9.050 | 1.740 |
Rmerge | 0.059 | 0.053 | 0.807 |
Rpim | 0.033 | 0.034 | 0.477 |
Total number of observations | 82661 | 606 | 3111 |
Number of reflections | 20972 | ||
<I/σ(I)> | 11.8 | 27.3 | 1.2 |
Completeness [%] | 98.7 | 94.2 | 83.4 |
Redundancy | 3.9 | 3.4 | 3.3 |
CC(1/2) | 0.997 | 0.991 | 0.682 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 40% 2-methyl-2,4-pentanediol; 0.1M Hepes, pH 7.0, 7.5mM CaCl2 |