5DKM
S. erythraea trypsin Michaelis-Menten complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-10-20 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.688 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 42.072, 47.441, 53.471 |
Unit cell angles | 90.00, 106.10, 90.00 |
Refinement procedure
Resolution | 28.194 - 0.920 |
R-factor | 0.1199 |
Rwork | 0.119 |
R-free | 0.12950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4m7g |
RMSD bond length | 0.008 |
RMSD bond angle | 1.067 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_2328: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.910 | 0.890 |
High resolution limit [Å] | 0.870 | 0.880 |
Rmerge | 0.072 | 2.601 |
Number of reflections | 159546 | |
<I/σ(I)> | 11.9 | 0.4 |
Completeness [%] | 99.8 | 99.2 |
Redundancy | 6.4 | 5.8 |
CC(1/2) | 0.998 | 0.275 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 100 mM MES, pH 6.0, 36% PEG400, 100 mM BTP , 120 mM sodium chloride |