5DKB
Crystal Structure of the ER-alpha Ligand-binding Domain in complex with a 3-methylphenylamino-substituted ethyl triaryl-ethylene derivative 4,4'-(2-{3-[(3-methylphenyl)amino]phenyl}but-1-ene-1,1-diyl)diphenol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-07-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.347, 82.844, 58.458 |
Unit cell angles | 90.00, 111.32, 90.00 |
Refinement procedure
Resolution | 47.364 - 2.400 |
R-factor | 0.1868 |
Rwork | 0.183 |
R-free | 0.22610 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.720 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.230 |
High resolution limit [Å] | 2.190 | 5.940 | 2.190 |
Rmerge | 0.057 | 0.020 | 0.663 |
Total number of observations | 175970 | ||
Number of reflections | 25440 | ||
<I/σ(I)> | 6 | ||
Completeness [%] | 99.0 | 98 | 99.5 |
Redundancy | 6.9 | 6.7 | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.3 | 294 | 15% PEG 3350, 0.05M MgCl2, 0.067M NaCl, 0.1M Tris |