5DK6
CRYSTAL STRUCTURE OF A 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE (MTA/SAH) NUCLEOSIDASE (MTAN) FROM COLWELLIA PSYCHRERYTHRAEA 34H (CPS_4743, TARGET PSI-029300) IN COMPLEX WITH ADENINE AT 2.27 A RESOLUTION
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-17 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.97931 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 145.427, 145.427, 70.341 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.280 - 2.270 |
R-factor | 0.21 |
Rwork | 0.208 |
R-free | 0.23710 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.201 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK (1.99.2) |
Phasing software | PHENIX (1.9-1692) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 26.000 | 2.360 |
High resolution limit [Å] | 2.268 | 2.270 |
Rmerge | 0.100 | 0.337 |
Number of reflections | 37023 | |
<I/σ(I)> | 11.5 | 2.148 |
Completeness [%] | 96.4 | 82.8 |
Redundancy | 3.9 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 292 | Protein (37.95 mg/ml, 20 mM HEPES pH 7.5, 150 mM Sodium Chloride, 5% v/v Glycerol, 5 mM DTT) were combined with an equal volume of Reservoir (100 mM Bicine pH 8.0, 1.98 M Ammonium Sulfate, 135 mM Sodium Succinate, 4 mM Glycine, 15 mM CYMAL-7); Cryoprotection (75 mM Bicine pH 8.0, 1.49 M Ammonium Sulfate, 101 mM Sodium Succinate, 3 mM Glycine, 11 mM CYMAL-7) |