Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5D9S

Structure of HLA-A2:01 with the 11-mer peptide F11V

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL7-1
Synchrotron siteSSRL
BeamlineBL7-1
Temperature [K]100
Detector technologyCCD
Collection date2015-07-22
DetectorADSC QUANTUM 315
Wavelength(s)1.12
Spacegroup nameP 1 21 1
Unit cell lengths53.330, 80.238, 56.855
Unit cell angles90.00, 113.17, 90.00
Refinement procedure
Resolution26.530 - 1.870
R-factor0.19095
Rwork0.190
R-free0.22305
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3mre
RMSD bond length0.006
RMSD bond angle1.144
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0124)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.910
High resolution limit [Å]1.8701.870
Number of reflections36209
<I/σ(I)>25.62.7
Completeness [%]99.899
Redundancy3.53.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293.1530% PEG 5000 MME, 0.1M Tris-HCl pH 8.0, 0.2M lithium sulfate

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon