5D5Q
HcgB from Methanocaldococcus jannaschii with the pyridinol derived from FeGP cofactor of [Fe]-hydrogenase
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X10SA |
| Synchrotron site | SLS |
| Beamline | X10SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2015-02-07 |
| Detector | PSI PILATUS 6M |
| Wavelength(s) | 1.000 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 64.910, 76.500, 65.100 |
| Unit cell angles | 90.00, 106.77, 90.00 |
Refinement procedure
| Resolution | 48.237 - 2.500 |
| R-factor | 0.2075 |
| Rwork | 0.206 |
| R-free | 0.23200 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3wb0 |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.128 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.600 | |
| High resolution limit [Å] | 2.500 | 12.000 | 2.500 |
| Rmerge | 0.048 | 0.022 | 0.338 |
| Rmeas | 0.057 | 0.026 | 0.401 |
| Total number of observations | 69158 | ||
| Number of reflections | 20900 | 208 | 2331 |
| <I/σ(I)> | 16.65 | 52.33 | 3.98 |
| Completeness [%] | 98.3 | 96.7 | 99.7 |
| Redundancy | 3.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 281 | 0.1 M sodium cacodylate (pH 6.5), 20 % (w/v) PEG8000, 0.2 M magnesium acetate |






