5CV1
C. elegans PGL-1 Dimerization Domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-08-08 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97857 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 59.720, 59.720, 227.240 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.070 - 3.599 |
R-factor | 0.3011 |
Rwork | 0.299 |
R-free | 0.32110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5cow |
RMSD bond length | 0.003 |
RMSD bond angle | 0.625 |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.070 | 47.070 | 3.726 |
High resolution limit [Å] | 3.599 | 16.100 | 3.599 |
Rmerge | 0.107 | 0.042 | 0.706 |
Rmeas | 0.112 | 0.044 | 0.730 |
Total number of observations | 61362 | ||
Number of reflections | 5264 | 59 | 397 |
<I/σ(I)> | 19.75 | 46.43 | 5.63 |
Completeness [%] | 99.9 | 93.7 | 100 |
Redundancy | 19.2 | 19.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.9 | 298 | 1.575-1.625 M Sodium Malonate pH 5.9, 50-100 mM GuCl, 1 mM TCEP, 0.02% Na azide |