5CU1
Crystal structure of DMSP lyase DddQ from Ruegeria pomeroyi DSS-3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-10-15 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 62.582, 69.878, 49.731 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.619 - 2.300 |
R-factor | 0.2189 |
Rwork | 0.216 |
R-free | 0.26740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4la2 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.119 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.620 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Number of reflections | 10150 | |
<I/σ(I)> | 9.69 | 1.95 |
Completeness [%] | 99.9 | 93.7 |
Redundancy | 5.9 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 291 | 0.1M ammonium acetate, 0.1M bis-tris pH 5.5, 17% w/v PEG 10,000 |