5CTL
Crystal Structure of the first bromodomain of human BRD4 in complex with benzo[cd]indol-2(1H)-one ligand
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | OTHER |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-22 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.97852 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.640, 47.340, 77.960 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.460 - 2.510 |
R-factor | 0.20262 |
Rwork | 0.201 |
R-free | 0.22687 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.567 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.9) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.340 | 47.340 | 2.610 |
High resolution limit [Å] | 2.510 | 9.050 | 2.510 |
Rmerge | 0.121 | 0.091 | 0.246 |
Rpim | 0.045 | 0.031 | 0.091 |
Total number of observations | 33047 | 1101 | 3700 |
Number of reflections | 4435 | ||
<I/σ(I)> | 10.3 | 16.2 | 5.7 |
Completeness [%] | 94.0 | 99.7 | 97.7 |
Redundancy | 7.5 | 8.2 | 7.4 |
CC(1/2) | 0.993 | 0.998 | 0.982 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 20% PEG3350, 0.2M NaNO3, 0.1M HEPES, 10% EtGhly,pH 7.0 |