Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5CRC

Structure of the SdeA DUB Domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyCCD
Collection date2015-04-26
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.979
Spacegroup nameP 21 21 21
Unit cell lengths36.542, 63.340, 136.508
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.955 - 2.853
R-factor0.2804
Rwork0.280
R-free0.29570
RMSD bond length0.006
RMSD bond angle1.474
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 Overall
Low resolution limit [Å]36.960
High resolution limit [Å]2.850
Rmerge0.264
Number of reflections7153
<I/σ(I)>11.1
Completeness [%]90.8
Redundancy10.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52770.1 M Tris:HCl, 3.0 M Sodium Chloride, 3% Methyl-2,4-Pentanediol

238268

PDB entries from 2025-07-02

PDB statisticsPDBj update infoContact PDBjnumon