5CPJ
Nucleosome containing methylated Sat2R DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-12-10 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 103.452, 108.990, 173.446 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.903 - 3.150 |
R-factor | 0.2387 |
Rwork | 0.235 |
R-free | 0.29550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3afa |
RMSD bond length | 0.010 |
RMSD bond angle | 1.331 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 50.000 |
High resolution limit [Å] | 3.150 |
Rmerge | 0.087 |
Number of reflections | 34975 |
<I/σ(I)> | 11.6 |
Completeness [%] | 99.3 |
Redundancy | 5.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | potassium cacodylate, potassium chloride, manganese chloride |