Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5CM1

X-ray structure of perdeuterated TTR mutant - T119M at 1.22A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2014-05-21
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97242
Spacegroup nameP 21 21 2
Unit cell lengths43.006, 85.617, 63.943
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.810 - 1.220
R-factor0.1649
Rwork0.163
R-free0.19600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4pvl
RMSD bond length0.024
RMSD bond angle2.155
Data reduction softwareXDS
Data scaling softwareSCALA (3.3.20)
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]63.94343.0061.290
High resolution limit [Å]1.2203.8601.220
Rmerge0.0420.601
Rmeas0.046
Rpim0.0220.0250.332
Total number of observations295295978240967
Number of reflections70831
<I/σ(I)>18.349.22.4
Completeness [%]99.799.499
Redundancy4.244
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52982.4M di-sodium malonate

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon