Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5CLF

Structure of PurE (N5-carboxyaminoimidazole ribonucleotide mutase) from the acidophilic bacterium Acetobacter aceti, at pH 8.5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]111
Detector technologyIMAGE PLATE
Collection date2005-08-13
DetectorRIGAKU RAXIS IV
Wavelength(s)1.54
Spacegroup nameI 4 2 2
Unit cell lengths99.430, 99.430, 164.168
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.524 - 2.000
R-factor0.1385
Rwork0.137
R-free0.16230
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)4ycb chain A
RMSD bond length0.011
RMSD bond angle1.230
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.5242.070
High resolution limit [Å]1.7992.000
Rmerge0.335
Number of reflections28092
<I/σ(I)>274.8
Completeness [%]99.098.6
Redundancy5.54.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52980.1 M Tris, 0.2 M lithium sulfate, 30% (w/v) PEG 4000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon