5CJX
Crystal structure of 8ANC195 Fab in complex with BG505 SOSIP.664 HIV-1 Env trimer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 117.739, 195.224, 119.094 |
Unit cell angles | 90.00, 101.60, 90.00 |
Refinement procedure
Resolution | 29.735 - 3.584 |
R-factor | 0.2401 |
Rwork | 0.239 |
R-free | 0.28620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries 4TVP & 4P9M |
RMSD bond length | 0.007 |
RMSD bond angle | 0.859 |
Data reduction software | XDS |
Data scaling software | Aimless (0.3.11) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX ((1.10pre_2100: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.735 | 29.760 | 3.730 |
High resolution limit [Å] | 3.584 | 15.840 | 3.584 |
Rmerge | 0.071 | 0.016 | 0.753 |
Rpim | 0.045 | 0.011 | 0.492 |
Total number of observations | 201456 | 2121 | 12959 |
Number of reflections | 61166 | ||
<I/σ(I)> | 14.4 | 66.8 | 1.7 |
Completeness [%] | 98.9 | 85.1 | 88.9 |
Redundancy | 3.4 | 3.3 | 3.2 |
CC(1/2) | 0.999 | 0.999 | 0.554 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 298 | 0.1 M Tris, pH 8.0, 15% PEG3350, 2% v/v 1,4-dioxane |