5CAB
Structure of Leishmania nucleoside diphostate kinase mutant Del5-Cterm
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | LNLS BEAMLINE W01B-MX2 |
| Synchrotron site | LNLS |
| Beamline | W01B-MX2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-05-08 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 1.458 |
| Spacegroup name | P 21 3 |
| Unit cell lengths | 113.212, 113.212, 113.212 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 35.801 - 2.953 |
| R-factor | 0.2304 |
| Rwork | 0.229 |
| R-free | 0.26570 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3ngs |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.199 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | MOLREP (11.0.05) |
| Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 3.060 |
| High resolution limit [Å] | 2.950 | 6.350 | 2.950 |
| Rmerge | 0.081 | 0.033 | 0.679 |
| Total number of observations | 51126 | ||
| Number of reflections | 10372 | ||
| <I/σ(I)> | 10.8 | ||
| Completeness [%] | 99.2 | 98.7 | 93.5 |
| Redundancy | 4.9 | 5 | 3.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.33 | 291 | ammonium sulfate, citric acid buffer |






