5C1B
p97-delta709-728 in complex with a UFD1-SHP peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-07-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 140.715, 180.664, 254.958 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.136 - 3.080 |
R-factor | 0.1997 |
Rwork | 0.198 |
R-free | 0.24020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3cf3 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.730 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.27) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.140 | 49.140 | 3.130 |
High resolution limit [Å] | 3.080 | 16.870 | 3.080 |
Rmerge | 0.119 | 0.042 | 2.582 |
Rpim | 0.037 | 0.013 | 0.813 |
Total number of observations | 1326505 | 8170 | 64372 |
Number of reflections | 120596 | ||
<I/σ(I)> | 12.8 | 40.6 | 1.1 |
Completeness [%] | 100.0 | 96.3 | 99.9 |
Redundancy | 11 | 9.9 | 10.9 |
CC(1/2) | 0.999 | 0.999 | 0.527 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 6.5-7% PEG 4000, 0.4-0.6 M potassium acetate, 0.1 M MES pH 5.75 |