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5C0U

Crystal structure of the copper-bound form of MerB mutant D99S

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2012-04-26
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.376
Spacegroup nameP 1 21 1
Unit cell lengths37.903, 88.958, 52.005
Unit cell angles90.00, 100.64, 90.00
Refinement procedure
Resolution31.071 - 1.870
R-factor0.1507
Rwork0.147
R-free0.19180
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3f0o
RMSD bond length0.009
RMSD bond angle1.233
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.900
High resolution limit [Å]1.8705.0701.870
Rmerge0.0520.0380.143
Rmeas0.0610.0450.170
Rpim0.0320.0230.091
Total number of observations86858
Number of reflections25316
<I/σ(I)>12.5
Completeness [%]90.49374.3
Redundancy3.43.53.3
CC(1/2)0.9970.972
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.529623 % polyethylene glycol 2000 MME, 0.2 M sodium acetate pH 5.5, 0.2 M potassium bromide. Before flash freezing, the same precipitant was used except 25 % polyethylene glycol 2000 MME was used as a cryo-protectant.

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