5BYS
Semisynthetic [FeFe]-hydrogenase CpI with sulfur-dithiolato-bridged [2Fe] cofactor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-07-17 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 89.830, 73.130, 103.040 |
Unit cell angles | 90.00, 96.60, 90.00 |
Refinement procedure
Resolution | 48.047 - 1.930 |
R-factor | 0.1584 |
Rwork | 0.158 |
R-free | 0.18790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xdc |
RMSD bond length | 0.014 |
RMSD bond angle | 1.283 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.030 | 1.980 | |
High resolution limit [Å] | 1.930 | 8.630 | 1.930 |
Rmerge | 0.145 | 0.045 | 0.860 |
Rmeas | 0.158 | 0.048 | 0.936 |
Total number of observations | 674928 | ||
Number of reflections | 674928 | 1186 | 7353 |
<I/σ(I)> | 9.93 | 34.69 | 2.05 |
Completeness [%] | 99.9 | 99.2 | 99.9 |
Redundancy | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 277 | 21% PEG 4000, 0.4 M MgCl,0.1 M MES, 19 % glycerol |