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5BW9

Crystal Structure of Yeast V1-ATPase in the Autoinhibited Form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F1
Synchrotron siteCHESS
BeamlineF1
Temperature [K]100
Detector technologyCCD
Collection date2015-02-22
DetectorADSC QUANTUM 270
Wavelength(s)0.9782
Spacegroup nameC 1 2 1
Unit cell lengths468.479, 159.740, 245.040
Unit cell angles90.00, 113.88, 90.00
Refinement procedure
Resolution40.101 - 7.000
R-factor0.2642
Rwork0.260
R-free0.30900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3vr5 chains A B C D E F
RMSD bond length0.001
RMSD bond angle0.423
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: dev_1957))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.01040.0007.120
High resolution limit [Å]7.00018.4007.000
Rmerge0.1890.093
Rmeas0.2010.100
Rpim0.0940.0350.821
Total number of observations222178
Number of reflections26115
<I/σ(I)>4.7
Completeness [%]100.0100100
Redundancy8.58.18.4
CC(1/2)0.9940.355
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROFLUIDIC7.52919.5 % PEG 8k, 150mM Ammonium Sulfate, 100mM HEPES, 12.5mM MgCl2

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