5B7S
Apo structure of Cysteine Desulfurase from Thermococcus onnurineus NA1
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-11 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.006, 92.527, 145.444 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.360 - 2.580 |
R-factor | 0.2078 |
Rwork | 0.203 |
R-free | 0.29510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1t3i |
RMSD bond length | 0.013 |
RMSD bond angle | 1.810 |
Data reduction software | DENZO |
Data scaling software | DENZO |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.640 |
High resolution limit [Å] | 2.580 | 2.600 |
Rmerge | 0.119 | 0.413 |
Number of reflections | 28968 | |
<I/σ(I)> | 29.1 | 7.1 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.8 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 287 | 0.03M MgCl2, 0.03 M CaCl2, 15% (v/v) glycerol, 15% (w/v) PEG 4000, 0.1M Tris (base)/ Bicine pH 8.5 |