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5B1L

The mouse nucleosome structure containing H3t

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-1A
Synchrotron sitePhoton Factory
BeamlineBL-1A
Temperature [K]100
Detector technologyPIXEL
Collection date2014-02-03
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1.1
Spacegroup nameP 21 21 21
Unit cell lengths98.968, 107.425, 167.332
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.833 - 2.350
R-factor0.1993
Rwork0.197
R-free0.24290
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2cv5
RMSD bond length0.010
RMSD bond angle1.261
Data scaling softwareHKL-2000 (704y)
Phasing softwarePHASER (2.5.6)
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.430
High resolution limit [Å]2.3505.0602.350
Rmerge0.0860.0580.454
Rmeas0.0940.0630.493
Rpim0.0360.0250.190
Total number of observations496153
Number of reflections75240
<I/σ(I)>5.9
Completeness [%]100.099.9100
Redundancy6.66.36.7
CC(1/2)0.9980.897
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6293potassium cacodylate, potassium chloride, manganese chloride

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