5AXQ
Crystal structure of the catalytic domain of PDE10A complexed with highly potent and brain-penetrant PDE10A Inhibitor with 2-oxindole scaffold
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-12-19 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97645 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.685, 81.793, 159.849 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.770 |
R-factor | 0.1725 |
Rwork | 0.171 |
R-free | 0.21090 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.172 |
Data scaling software | SCALEPACK |
Refinement software | REFMAC (refmac_5.8.0049) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.800 |
High resolution limit [Å] | 1.770 | 4.800 | 1.770 |
Rmerge | 0.071 | 0.032 | |
Rmeas | 0.075 | 0.035 | |
Rpim | 0.031 | 0.013 | 0.467 |
Total number of observations | 376638 | ||
Number of reflections | 59305 | ||
<I/σ(I)> | 11.5 | ||
Completeness [%] | 92.4 | 99 | 91.4 |
Redundancy | 6.4 | 6.7 | 6.1 |
CC(1/2) | 0.999 | 0.663 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.4 | 277 | 200 mM HEPES pH 7.4, 100 mM mM magnesium chloride hexahydrate, 27.4% PEG 3350 |