5AXF
Crystal Structure Analysis of DNA Duplexes containing sulfoamide-bridged nucleic acid (SuNA-NMe)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL44XU |
| Synchrotron site | SPring-8 |
| Beamline | BL44XU |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-05-14 |
| Detector | RAYONIX MX300HE |
| Wavelength(s) | 0.9 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 24.420, 45.120, 45.450 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 22.725 - 1.130 |
| R-factor | 0.1312 |
| Rwork | 0.131 |
| R-free | 0.14480 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.018 |
| RMSD bond angle | 2.096 |
| Data scaling software | Aimless (0.2.17) |
| Phasing software | PHASER (2.5.6) |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 32.020 | 32.020 | 1.150 |
| High resolution limit [Å] | 1.130 | 6.080 | 1.130 |
| Rmerge | 0.061 | 0.032 | 0.378 |
| Rpim | 0.025 | 0.016 | 0.157 |
| Total number of observations | 131157 | 447 | 6485 |
| Number of reflections | 19277 | ||
| <I/σ(I)> | 17.1 | 24.8 | 4.6 |
| Completeness [%] | 98.6 | 65.4 | 98.3 |
| Redundancy | 6.8 | 4.3 | 6.6 |
| CC(1/2) | 0.999 | 0.998 | 0.905 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | MPD |






